miRBase entry: aca-mir-203

Stem-loop aca-mir-203


Accession
MI0018805
Description
Anolis carolinensis aca-mir-203 precursor miRNA
Gene family
MIPF0000108; mir-203


Sequence

caaauccaagccugcugggugcAGUGGUUCUUAACAGUUCAACAGuucucuauuauaauuGUGAAAUGUUUAGGACCACUUGauccggcgggcccagg
.........(((((((((((..(((((((((.((((.((((.(((((.........))))))))).)))).)))))))))..))))))))))).....

Structure
caaauccaa           gc         U    G    A     cuc 
         gccugcugggu  AGUGGUUCU AACA UUCA CAGuu   u
         |||||||||||  ||||||||| |||| |||| |||||   a
         cgggcggccua  UCACCAGGA UUGU AAGU Guuaa   u
----ggacc           GU         U    A    -     uau 


Annotation confidence Not enough data
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Genome context
chr1: 5622429-5622526 [-]

Database links

Mature aca-miR-203-5p

Accession MIMAT0021851
Description Anolis carolinensis aca-miR-203-5p mature miRNA
Sequence 23 - AGUGGUUCUUAACAGUUCAACAG - 45
Evidence experimental
Illumina [1]

Mature aca-miR-203-3p

Accession MIMAT0021852
Description Anolis carolinensis aca-miR-203-3p mature miRNA
Sequence 61 - GUGAAAUGUUUAGGACCACUUG - 82
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107