Stem-loop aca-mir-210

Accession

MI0018815

Description

Anolis carolinensis aca-mir-210 precursor miRNA

Gene family

MIPF0000086; mir-210

Sequence

ccaguucuccaggagcagaugAGCCACUGACUAACGCACAUUGugcuucucguguccccaCUGUGCGUGUGACAGCGGCUAaccugcuuuucggac
.......(((((((((((...((((.(((.(..(((((((.((.((.......))...)).)))))))..).))).))))...)))))))).))).

Structure

ccaguuc   -        aug    A   A UA       U  --u  uu 
       ucc aggagcag   AGCC CUG C  ACGCACA UG   gc  c
       ||| ||||||||   |||| ||| |  ||||||| ||   ||  u
       agg uuuucguc   UCGG GAC G  UGCGUGU ac   ug  c
------c   c        caA    C   A UG       C  ccc  ug 

Annotation confidence Not enough data

Genome context

chr1: 74505514-74505609 [+]

Mature aca-miR-210-5p

• Accession: MIMAT0021867
• Description: Anolis carolinensis aca-miR-210-5p mature miRNA
• Sequence: 22 - AGCCACUGACUAACGCACAUUG - 43
• Evidence: experimental ; Illumina [1]

Mature aca-miR-210-3p

• Accession: MIMAT0021868
• Description: Anolis carolinensis aca-miR-210-3p mature miRNA
• Sequence: 61 - CUGUGCGUGUGACAGCGGCUA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107