Stem-loop aca-mir-214

Accession

MI0018817

Description

Anolis carolinensis aca-mir-214 precursor miRNA

Gene family

MIPF0000062; mir-214

Sequence

cagaguugucaugugucUGCCUGUCUACACUUGCUGUGCagaacauccucucaccuguACAGCAGGCACAGACAGGCAGUcacaugacaacccag
..(.(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))))).)..

Structure

ca a           u          ACA            aacau 
  g guugucaugug cUGCCUGUCU   CUUGCUGUGCag     c
  | ||||||||||| ||||||||||   ||||||||||||     c
  c caacaguacac GACGGACAGA   GGACGACAuguc     u
ga c           U          CAC            cacuc 

Annotation confidence Not enough data

Genome context

AAWZ02037129.1: 14613-14707 [+]

Mature aca-miR-214-5p

• Accession: MIMAT0021871
• Description: Anolis carolinensis aca-miR-214-5p mature miRNA
• Sequence: 18 - UGCCUGUCUACACUUGCUGUGC - 39
• Evidence: experimental ; Illumina [1]

Mature aca-miR-214-3p

• Accession: MIMAT0021872
• Description: Anolis carolinensis aca-miR-214-3p mature miRNA
• Sequence: 59 - ACAGCAGGCACAGACAGGCAGU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107