Stem-loop aca-mir-219-1

Accession

MI0018825

Description

Anolis carolinensis aca-mir-219-1 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

uccagaaggaaccuuugcuccUGAUUGUCCAAACGCAAUUCUUGuccagaaaacaugcaaaccAAGAAUUGUGUCUGGACAUCUGuggccaagucu
(((....)))..(((.(((.(.(((.(((((.((((((((((((..................)))))))))))).)))))))).).))).)))...

Structure

uccagaaggaac   u   c U   U     A            uccagaaa 
            cuu gcu c GAU GUCCA ACGCAAUUCUUG        a
            ||| ||| | ||| ||||| ||||||||||||         
            gaa cgg G CUA CAGGU UGUGUUAAGAAc        c
---------ucu   c   u U   -     C            caaacgua 

Annotation confidence Not enough data

Genome context

GL344072.1: 36976-37071 [+]

Mature aca-miR-219-1-3p

• Accession: MIMAT0021885
• Description: Anolis carolinensis aca-miR-219-1-3p mature miRNA
• Sequence: 64 - AAGAAUUGUGUCUGGACAUCUG - 85
• Evidence: experimental ; Illumina [1]

Mature aca-miR-219-5p

• Accession: MIMAT0021884
• Description: Anolis carolinensis aca-miR-219-5p mature miRNA
• Sequence: 22 - UGAUUGUCCAAACGCAAUUCUUG - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107