Stem-loop aca-mir-223

Accession

MI0018830

Description

Anolis carolinensis aca-mir-223 precursor miRNA

Gene family

MIPF0000067; mir-223

Sequence

acgcagggcuucccucCGUGUAUUUGACGAUCUGAUCGCacacuccgucugcaccagagUGUCAGUUUGUCAAAUAUACAAagggcggccucu
.....(((((.((((..(((((((((((((.((((.....(((((.(.......).))))))))).)))))))))))))..)))).)))))..

Structure

acgca     u    cC             U    UCGCa     c uc 
     gggcu cccu  GUGUAUUUGACGA CUGA     cacuc g  u
     ||||| ||||  ||||||||||||| ||||     ||||| |  g
     uccgg ggga  CAUAUAAACUGUU GACU     GUgag c  c
---uc     c    AA             U    -----     a ca 

Annotation confidence Not enough data

Genome context

GL343465.1: 618358-618450 [+]

Mature aca-miR-223-5p

• Accession: MIMAT0021893
• Description: Anolis carolinensis aca-miR-223-5p mature miRNA
• Sequence: 17 - CGUGUAUUUGACGAUCUGAUCGC - 39
• Evidence: experimental ; Illumina [1]

Mature aca-miR-223-3p

• Accession: MIMAT0021894
• Description: Anolis carolinensis aca-miR-223-3p mature miRNA
• Sequence: 60 - UGUCAGUUUGUCAAAUAUACAA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107