Stem-loop aca-mir-23b

Accession

MI0018832

Description

Anolis carolinensis aca-mir-23b precursor miRNA

Gene family

MIPF0000027; mir-23

Sequence

guuuugguuguuuGGGUUCCUGGCAUGCUGAUUUgugacuuaagaugaaaAUCACAUUGCCAGGGAUUACCacauaaccaugacac
(((.(((((((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))))))).)))..

Structure

--   u       u   --          -  C      gugacu 
  guu ugguugu uGG  GUUCCUGGCA UG UGAUUU      u
  ||| ||||||| |||  |||||||||| || ||||||       
  cag accaaua aCC  UAGGGACCGU AC ACUAaa      a
ca   u       c   AU          U  -      aguaga 

Annotation confidence Not enough data

Genome context

chr2: 40591992-40592077 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from aca-mir-23b

Mature aca-miR-23b-5p

• Accession: MIMAT0021897
• Description: Anolis carolinensis aca-miR-23b-5p mature miRNA
• Sequence: 14 - GGGUUCCUGGCAUGCUGAUUU - 34
• Evidence: experimental ; Illumina [1]

Mature aca-miR-23b-3p

• Accession: MIMAT0021898
• Description: Anolis carolinensis aca-miR-23b-3p mature miRNA
• Sequence: 51 - AUCACAUUGCCAGGGAUUACC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107