miRBase entry: aca-mir-26-2

Stem-loop aca-mir-26-2


Accession
MI0018836
Description
Anolis carolinensis aca-mir-26-2 precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
1 open access papers mention aca-mir-26-2
(2 sentences)

Sequence

agaggcugugaccugcUUCAAGUAAUCCAGGAUAGGcugugugcauucuuaauggCCUAUCCUUGAUUACUUGCACUgggaaauagccacagcg
...((((((..((((...(((((((((.((((((((((((...........)))))))))))).)))))))))...))))..))))))......

Structure
---aga      ga    cUU         C            gugc 
      ggcugu  ccug   CAAGUAAUC AGGAUAGGcugu    a
      ||||||  ||||   ||||||||| ||||||||||||    u
      ccgaua  gggU   GUUCAUUAG UCCUAUCCggua    u
gcgaca      aa    CAC         U            auuc 


Annotation confidence Not enough data
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Genome context
chr6: 1202352-1202445 [-]

Database links

Mature aca-miR-26-5p

Accession MIMAT0021902
Description Anolis carolinensis aca-miR-26-5p mature miRNA
Sequence 17 - UUCAAGUAAUCCAGGAUAGG - 36
Evidence experimental
Illumina [1]

Mature aca-miR-26-2-3p

Accession MIMAT0021904
Description Anolis carolinensis aca-miR-26-2-3p mature miRNA
Sequence 56 - CCUAUCCUUGAUUACUUGCACU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107