Stem-loop aca-mir-363

Accession

MI0018860

Description

Anolis carolinensis aca-mir-363 precursor miRNA

Gene family

MIPF0000138; mir-363

Sequence

cuuguguuuugcuguugucggGUGGAUCACGAUGCAAUUUUGAuuagauuagcaggacgaaAAUUGCACGGUAUCCAUCUGUaaaccgcaggaccuucg
.....(((((((.(((..(((((((((..((.(((((((((..................)))))))))))..)))))))))..))).))))))).....

Structure

cuugu       u   gu         CA  A         GAuuagau 
     guuuugc guu  cggGUGGAU  CG UGCAAUUUU        u
     ||||||| |||  |||||||||  || |||||||||         
     caggacg caa  GUCUACCUA  GC ACGUUAAaa        a
gcuuc       c   aU         UG  -         gcaggacg 

Annotation confidence Not enough data

Genome context

GL344214.1: 24588-24686 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from aca-mir-363

Mature aca-miR-363-5p

• Accession: MIMAT0021945
• Description: Anolis carolinensis aca-miR-363-5p mature miRNA
• Sequence: 22 - GUGGAUCACGAUGCAAUUUUGA - 43
• Evidence: experimental ; Illumina [1]

Mature aca-miR-363-3p

• Accession: MIMAT0021946
• Description: Anolis carolinensis aca-miR-363-3p mature miRNA
• Sequence: 62 - AAUUGCACGGUAUCCAUCUGU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107