miRBase entry: aca-mir-456

Stem-loop aca-mir-456


Accession
MI0018872
Description
Anolis carolinensis aca-mir-456 precursor miRNA
Gene family
MIPF0000341; mir-456


Sequence

uguuauguguaugugugagcaggcaucuucucagccuacauguggauuccuaaaucugCAGGCUGGUUAGAUGGUUGUCauacauucaucuaauguc
.((((.(((.((((((((.(((.(((((..(((((((....(((((((....))))))))))))))..))))).))))))))))).))).))))...

Structure
--u    u   u        g   g     uc       acau       c 
   guua gug auguguga cag caucu  ucagccu    guggauu c
   |||| ||| |||||||| ||| |||||  |||||||    |||||||  
   uaau uac uacauaCU GUU GUAGA  GGUCGGA    Cgucuaa u
cug    c   u        -   G     UU       ----       a 


Annotation confidence Not enough data
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Genome context
chr1: 231781979-231782075 [-]

Database links

Mature aca-miR-456

Accession MIMAT0021966
Description Anolis carolinensis aca-miR-456 mature miRNA
Sequence 59 - CAGGCUGGUUAGAUGGUUGUC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107