Stem-loop aca-mir-551

Accession

MI0018881

Description

Anolis carolinensis aca-mir-551 precursor miRNA

Gene family

MIPF0000360; mir-551

Sequence

caguggcuccagaaaucaagguugggugagaccucgugaacagacuggaagGCGACCCAUACUUGGUUUCAGgagcuucgaggauuuauuc
..(.((((((.(((((((((..(((((..(.((((............).)))).)))))..))))))))).)))))).)............

Structure

----------ca u      a         gu     ga a   - gugaa 
            g ggcucc gaaaucaag  ugggu  g ccu c     c
            | |||||| |||||||||  |||||  | ||| |      
            c ucgagG CUUUGGUUC  ACCCA  C Gga g     a
cuuauuuaggag u      A         AU     -G -   a gucag 

Annotation confidence Not enough data

Genome context

chr3: 8819992-8820082 [-]

Mature aca-miR-551

• Accession: MIMAT0021982
• Description: Anolis carolinensis aca-miR-551 mature miRNA
• Sequence: 52 - GCGACCCAUACUUGGUUUCAG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107