miRBase entry: aca-mir-99a

Stem-loop aca-mir-99a

Accession

MI0018894

Description

Anolis carolinensis aca-mir-99a precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

ggcauaAACCCGUAGAUCCGAUCUUGUGgugaaguauaaugcaCAAGCUCGCUUCUAUGGGUCuguguc
((((((.(((((((((..(((.((((((.............)))))).)))..))))))))).))))))

Structure

      A         UC   U      gugaa 
ggcaua ACCCGUAGA  CGA CUUGUG     g
|||||| |||||||||  ||| ||||||     u
cugugu UGGGUAUCU  GCU GAACac     a
      C         UC   C      guaau

Annotation confidence Not enough data

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Genome context

chr3: 154034468-154034536 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-99a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-99a-5p

Accession	MIMAT0021996
Description	Anolis carolinensis aca-miR-99a-5p mature miRNA
Sequence	7 - AACCCGUAGAUCCGAUCUUGUG - 28
Evidence	experimental Illumina [1]

Mature aca-miR-99a-3p

Accession	MIMAT0021997
Description	Anolis carolinensis aca-miR-99a-3p mature miRNA
Sequence	44 - CAAGCUCGCUUCUAUGGGUC - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 21775315
MicroRNAs support a turtle + lizard clade
"Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
"Biol Lett (2012) 8:104-107