Stem-loop aca-mir-5403

Accession

MI0018906

Description

Anolis carolinensis aca-mir-5403 precursor miRNA

Sequence

cuggggcaaaggaaACGGAAAAGAGAUAAGGAAUGCuuuuggaucaggaauuccuucucacuuuccccuuucuguuugucuuuc
..(((((((((((((.((.((((.((.(((((((.(((.......))).))))))).)).)))).)).))))).))))))))..

Structure

cu        -     C  A    A  U       G   uu 
  ggggcaaa ggaaA GG AAAG GA AAGGAAU Cuu  g
  |||||||| ||||| || |||| || ||||||| |||  g
  uucuguuu ucuuu cc uuuc cu uuccuua gga  a
cu        g     c  c    a  c       a   cu 

Annotation confidence Not enough data

Genome context

chr5: 24584097-24584180 [+]

Mature aca-miR-5403

• Accession: MIMAT0022016
• Description: Anolis carolinensis aca-miR-5403 mature miRNA
• Sequence: 15 - ACGGAAAAGAGAUAAGGAAUGC - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107