miRBase entry: aca-mir-5410

Stem-loop aca-mir-5410


Accession
MI0018913
Description
Anolis carolinensis aca-mir-5410 precursor miRNA


Sequence

uccacCGUUGUCGCGUUCUGAGAUGUCcagcuugugccuggauuucaggCUGACAUCUCAGAACUCGAGAacaguaca
...((.(((.(((.(((((((((((((.((((((...........))))))))))))))))))).))).))).))...

Structure
ucc  C   G   C             c      ugcc 
   ac GUU UCG GUUCUGAGAUGUC agcuug    u
   || ||| ||| ||||||||||||| ||||||    g
   ug caA AGC CAAGACUCUACAG UCggac    g
aca  a   G   U             -      uuua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aca-miR-5410-5p

Accession MIMAT0022027
Description Anolis carolinensis aca-miR-5410-5p mature miRNA
Sequence 6 - CGUUGUCGCGUUCUGAGAUGUC - 27
Evidence experimental
Illumina [1]

Mature aca-miR-5410-3p

Accession MIMAT0022028
Description Anolis carolinensis aca-miR-5410-3p mature miRNA
Sequence 50 - CUGACAUCUCAGAACUCGAGA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107