Stem-loop aca-mir-5414

Accession

MI0018917

Description

Anolis carolinensis aca-mir-5414 precursor miRNA

Sequence

ugcacggaugggggaaaccugugacucaaggacuacauaucccccauaagucuGGUUCUUGUCCUGGGCUCCCcccguaug
...((((...(((((..((.(.(((..((((((((.((...........)).)))))))))))).))..)))))))))...

Structure

ugc    aug     aa  u u   uc        c  aucc 
   acgg   gggga  cc g gac  aaggacua au    c
   ||||   |||||  || | |||  |||||||| ||    c
   ugcc   cCCCU  GG C CUG  UUCUUGGu ug    c
gua    ---     CG  U -   --        c  aaua 

Annotation confidence Not enough data

Genome context

chr2: 156454650-156454730 [+]

Mature aca-miR-5414

• Accession: MIMAT0022034
• Description: Anolis carolinensis aca-miR-5414 mature miRNA
• Sequence: 54 - GGUUCUUGUCCUGGGCUCCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107