miRBase entry: aca-mir-5424

Stem-loop aca-mir-5424


Accession
MI0018927
Description
Anolis carolinensis aca-mir-5424 precursor miRNA


Sequence

agaugcagauuuggaugguuguugcccgguggguggggcuacaggccCAGGGUCGGCUGCCAGGAUGGCucucgcgcucu
(((((((((.(((..((((.(((((((..(((((..(....)..)))))))).)))).))))...))).))).))).)))

Structure
   -   -   u   -ga    u    -   gg     gg g 
aga ugc aga uug   uggu guug ccc  ugggu  g c
||| ||| ||| |||   |||| |||| |||  |||||  |  
ucu gcg ucu GGU   ACCG CGGC GGG  ACccg  c u
   c   c   C   AGG    U    U   --     ga a 


Annotation confidence Not enough data
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Genome context
GL343805.1: 101473-101552 [-]

Database links

Mature aca-miR-5424

Accession MIMAT0022044
Description Anolis carolinensis aca-miR-5424 mature miRNA
Sequence 48 - CAGGGUCGGCUGCCAGGAUGGC - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107