miRBase entry: aca-mir-5426

Stem-loop aca-mir-5426


Accession
MI0018929
Description
Anolis carolinensis aca-mir-5426 precursor miRNA


Sequence

gcagugcagaugCACUCUAAGUCUACUUCCACAGucuucacuucaugcaucUGAGGAAGUAAACUUGGACUacaaaugcauacg
...(((((..((...(((((((.(((((((.(((................))).))))))).)))))))...))..)))))...

Structure
gca     ga  CAC       C       A   ucuucac 
   gugca  ug   UCUAAGU UACUUCC CAG       u
   |||||  ||   ||||||| ||||||| |||        
   uacgu  ac   AGGUUCA AUGAAGG GUc       u
gca     aa  aUC       A       A   uacguac 


Annotation confidence Not enough data
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Genome context
chr3: 195203192-195203275 [+]

Database links

Mature aca-miR-5426-5p

Accession MIMAT0022046
Description Anolis carolinensis aca-miR-5426-5p mature miRNA
Sequence 13 - CACUCUAAGUCUACUUCCACAG - 34
Evidence experimental
Illumina [1]

Mature aca-miR-5426-3p

Accession MIMAT0022047
Description Anolis carolinensis aca-miR-5426-3p mature miRNA
Sequence 52 - UGAGGAAGUAAACUUGGACU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107