miRBase entry: aca-mir-5427

Stem-loop aca-mir-5427


Accession
MI0018930
Description
Anolis carolinensis aca-mir-5427 precursor miRNA


Sequence

ggagacggcggggagaaggagaagggcaaggcuccggaggucaggcucuccAGUCUGGCCCUUCCUCUUCUUUuccucucucc
(((((.((.((((((((((.(((((((.(((((..(((((......)))))))))).))))))).)))))))))))).)))))

Structure
     c  c          a       a     cc     uc 
ggaga gg ggggagaagg gaagggc aggcu  ggagg  a
||||| || |||||||||| ||||||| |||||  |||||   
ccucu uc cuUUUCUUCU CUUCCCG UCUGA  ccucu  g
     c  -          C       G     --     cg 


Annotation confidence Not enough data
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Genome context
chr1: 162797257-162797339 [+]

Database links

Mature aca-miR-5427

Accession MIMAT0022048
Description Anolis carolinensis aca-miR-5427 mature miRNA
Sequence 52 - AGUCUGGCCCUUCCUCUUCUUU - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107