Stem-loop aca-mir-5429

Accession

MI0018932

Description

Anolis carolinensis aca-mir-5429 precursor miRNA

Gene family

MIPF0001315; mir-5429

Sequence

acauguuauuuucuaggaaucucuagaucccccagugugauucuauggucaauuuuucuAUAGUCAUGCUGGAGGACCUCGagauuucuagagagaacau
..(((((.(((((((((((((((.((.(((.(((((((((..((((((.........))))))))))))))).))).)).))))))))))))))))))))

Structure

ac     a               u  a   c         uu      uca 
  auguu uuuucuaggaaucuc ag ucc ccaguguga  cuaugg   a
  ||||| ||||||||||||||| || ||| |||||||||  ||||||   u
  uacaa gagagaucuuuagaG UC AGG GGUCGUACU  GAUAuc   u
--     -               C  C   A         --      uuu 

Annotation confidence Not enough data

Genome context

chr1: 226227843-226227942 [+]

Mature aca-miR-5429

• Accession: MIMAT0022050
• Description: Anolis carolinensis aca-miR-5429 mature miRNA
• Sequence: 60 - AUAGUCAUGCUGGAGGACCUCG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107