Stem-loop aca-mir-5433

Accession

MI0018936

Description

Anolis carolinensis aca-mir-5433 precursor miRNA

Sequence

aguugccaggaccagaggagacugucauaaacuucuacauauauuguugaaaugUUUAGGACUGUCUCCUCUGGUUUcugacaguu
..(((.((((((((((((((((.(((.((((((((.(((.....))).)))..))))).))).))))))))))).))))).)))..

Structure

ag   c     -           u   a     --   u   u 
  uug cagga ccagaggagac guc uaaac  uuc aca a
  ||| ||||| ||||||||||| ||| |||||  ||| ||| u
  gac gucUU GGUCUCCUCUG CAG AUUUg  aag ugu a
uu   a     U           U   G     ua   u   u 

Annotation confidence Not enough data

Genome context

chr5: 15643852-15643937 [-]

Mature aca-miR-5433

• Accession: MIMAT0022054
• Description: Anolis carolinensis aca-miR-5433 mature miRNA
• Sequence: 55 - UUUAGGACUGUCUCCUCUGGUUU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107