Stem-loop aca-mir-5441

Accession

MI0018944

Description

Anolis carolinensis aca-mir-5441 precursor miRNA

Sequence

uucucucagacuggcucuugaagccugaguacuaauagaagucugggcucuuUUUAGUACUCGGACUUCAAGAGcuaauuugggacua
...(((((((.((((((((((((.(((((((((((.(((.((....)))))..))))))))))).)))))))))))).)))))))...

Structure

uuc       c            c           -u   a  c 
   ucucaga uggcucuugaag cugaguacuaa  aga gu u
   ||||||| |||||||||||| |||||||||||  ||| ||  
   aggguuu aucGAGAACUUC GGCUCAUGAUU  ucu cg g
auc       a            A           Uu   -  g 

Annotation confidence Not enough data

Genome context

chr1: 204635330-204635417 [+]

Mature aca-miR-5441

• Accession: MIMAT0022063
• Description: Anolis carolinensis aca-miR-5441 mature miRNA
• Sequence: 53 - UUUAGUACUCGGACUUCAAGAG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107