miRBase entry: aca-mir-5450

Stem-loop aca-mir-5450


Accession
MI0018953
Description
Anolis carolinensis aca-mir-5450 precursor miRNA


Sequence

ugcuuugagggauuAGAGUUCUCAGAAUCUUCCAauuggcacauauacacuggaagauuuugagaacuauggucuccaaaaac
...((((.(((((((.((((((((((((((((((..((.........)).)))))))))))))))))).)))))))))))...

Structure
ugc    a       G                  au  gca 
   uuug gggauuA AGUUCUCAGAAUCUUCCA  ug   c
   |||| ||||||| ||||||||||||||||||  ||   a
   aaac cucuggu ucaagaguuuuagaaggu  ac   u
caa    -       a                  -c  aua 


Annotation confidence Not enough data
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Genome context
chr2: 94292263-94292345 [+]

Database links

Mature aca-miR-5450

Accession MIMAT0022072
Description Anolis carolinensis aca-miR-5450 mature miRNA
Sequence 15 - AGAGUUCUCAGAAUCUUCCA - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107