Stem-loop aca-mir-5408b

Accession

MI0018954

Description

Anolis carolinensis aca-mir-5408b precursor miRNA

Gene family

MIPF0001313; mir-5408

Sequence

uccgggccuuucggaccACAACUCCCACAAUCCUUUGUCauaggcucgacuggcuggggauucugggaguuggagucccaggggccucaa
...((((((((.((((..(((((((((.(((((((.((((..........)))).))))))).)))))))))..)))).))))))))...

Structure

ucc        c    cA         C       U    uagg 
   gggccuuu ggac  CAACUCCCA AAUCCUU GUCa    c
   |||||||| ||||  ||||||||| ||||||| ||||     
   uccgggga ccug  guugagggu uuagggg cggu    u
aac        c    ag         c       u    cagc 

Annotation confidence Not enough data

Genome context

GL343557.1: 135477-135566 [+]

Mature aca-miR-5408b

• Accession: MIMAT0022073
• Description: Anolis carolinensis aca-miR-5408b mature miRNA
• Sequence: 18 - ACAACUCCCACAAUCCUUUGUC - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107