Stem-loop aca-mir-5408c

Accession

MI0018957

Description

Anolis carolinensis aca-mir-5408c precursor miRNA

Sequence

uguuuuguuagacuguAACUCCCAAGAAUCCUGCAGccagcauguuaugguuggUUGGGGAAUUCUGGGAGAUGUaguccaaacaaguaa
...((((((.(((((((.((((((.((((.((.((((((((........)))))))).)).)))))))))).)))))))..))))))...

Structure

ugu      -a       A      A    C  G        aug 
   uuuguu  gacuguA CUCCCA GAAU CU CAGccagc   u
   ||||||  ||||||| |||||| |||| || ||||||||    
   gaacaa  cugaUGU GAGGGU CUUA GG GUUgguug   u
aau      ac       A      -    A  G        gua 

Annotation confidence Not enough data

Genome context

GL343460.1: 441126-441215 [-]

Mature aca-miR-5408c-5p

• Accession: MIMAT0022077
• Description: Anolis carolinensis aca-miR-5408c-5p mature miRNA
• Sequence: 17 - AACUCCCAAGAAUCCUGCAG - 36
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5408c-3p

• Accession: MIMAT0022078
• Description: Anolis carolinensis aca-miR-5408c-3p mature miRNA
• Sequence: 55 - UUGGGGAAUUCUGGGAGAUGU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107