miRBase entry: aca-mir-5457

Stem-loop aca-mir-5457


Accession
MI0018962
Description
Anolis carolinensis aca-mir-5457 precursor miRNA


Sequence

gucccagcuaggguagaccuauugaaucaguguguuaaguguuuacucgccauUCAACAGCUGAUUCAUUGGAUCuacucugguugguuu
...((((((((((((((.(((.(((((((((.((((.((((.........)))).))))))))))))).))).))))))))))))))...

Structure
guc              c   u         g    a    uuu 
   ccagcuaggguaga cua ugaaucagu uguu agug   a
   |||||||||||||| ||| ||||||||| |||| ||||   c
   gguuggucucauCU GGU ACUUAGUCG ACAA Uuac   u
uuu              A   U         -    C    cgc 


Annotation confidence Not enough data
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Genome context
chr1: 230956062-230956151 [-]

Database links

Mature aca-miR-5457

Accession MIMAT0022084
Description Anolis carolinensis aca-miR-5457 mature miRNA
Sequence 54 - UCAACAGCUGAUUCAUUGGAUC - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107