miRBase entry: aca-mir-5435b

Stem-loop aca-mir-5435b


Accession
MI0018968
Description
Anolis carolinensis aca-mir-5435b precursor miRNA


Sequence

cagagucauucugGAUGACCUAGAAAAUUCCUAGagagguaucauauuUAGGAAUUUGCUAGUUCUUCCAggaagacugca
...((((.(((((((.((.((((.(((((((((((...........))))))))))).)))).)).))))))).))))...

Structure
cag    a       U  C    A           gagg 
   aguc uucugGA GA CUAG AAAUUCCUAGa    u
   |||| ||||||| || |||| |||||||||||    a
   ucag aggACCU CU GAUC UUUAAGGAUuu    u
acg    a       U  U    G           auac 


Annotation confidence Not enough data
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Genome context
chr2: 25825594-25825674 [+]

Database links

Mature aca-miR-5435b-3p

Accession MIMAT0022090
Description Anolis carolinensis aca-miR-5435b-3p mature miRNA
Sequence 14 - GAUGACCUAGAAAAUUCCUAG - 34
Evidence experimental
Illumina [1]

Mature aca-miR-5435b-5p

Accession MIMAT0022091
Description Anolis carolinensis aca-miR-5435b-5p mature miRNA
Sequence 49 - UAGGAAUUUGCUAGUUCUUCCA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107