miRBase entry: aca-mir-5435c

Stem-loop aca-mir-5435c


Accession
MI0018969
Description
Anolis carolinensis aca-mir-5435c precursor miRNA


Sequence

auggagucauacUGGAGGAUCUAGCAAAUGCCUAGaaaaaauaacuuUAGGCAUUACUAGGACCUCCGGCucgucugu
...(((((.....(((((.(((((..((((((((((.........)))))))))).))))).))))))))))......

Structure
---aug     auacU     A     CA          aaa 
      gaguc     GGAGG UCUAG  AAUGCCUAGa   a
      |||||     ||||| |||||  ||||||||||   a
      cuCGG     CCUCC GGAUC  UUACGGAUuu   u
ugucug     -----     A     -A          caa 


Annotation confidence Not enough data
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Genome context
GL343325.1: 393517-393594 [-]

Database links

Mature aca-miR-5435c-3p

Accession MIMAT0022092
Description Anolis carolinensis aca-miR-5435c-3p mature miRNA
Sequence 13 - UGGAGGAUCUAGCAAAUGCCUAG - 35
Evidence experimental
Illumina [1]

Mature aca-miR-5435c-5p

Accession MIMAT0022093
Description Anolis carolinensis aca-miR-5435c-5p mature miRNA
Sequence 48 - UAGGCAUUACUAGGACCUCCGGC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107