miRBase entry: mtr-MIR5555

Stem-loop mtr-MIR5555


Accession
MI0019076
Description
Medicago truncatula mtr-MIR5555 precursor miRNA


Sequence

uacauguaucUAAGAGUAUAAUAUGACUUUGauuaugacacacuuugagugauguugccauaaucgAAGUCGUAUUACACUCUUAGAuacaucaa
...((((((((((((((.((((((((((((((((((((((((((...)))).)))...))))))))))))))))))).))))))))))))))...

Structure
uac              A                   ---   -    u 
   auguaucUAAGAGU UAAUAUGACUUUGauuaug   aca cacu  
   |||||||||||||| |||||||||||||||||||   ||| |||| u
   uacauAGAUUCUCA AUUAUGCUGAAgcuaauac   ugu guga  
aac              C                   cgu   a    g 


Annotation confidence Not enough data
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Genome context
chr1: 13399421-13399515 [-]

Database links

Mature mtr-miR5555-5p

Accession MIMAT0022201
Description Medicago truncatula mtr-miR5555-5p mature miRNA
Sequence 11 - UAAGAGUAUAAUAUGACUUUG - 31
Evidence experimental
Illumina [1]

Mature mtr-miR5555-3p

Accession MIMAT0022202
Description Medicago truncatula mtr-miR5555-3p mature miRNA
Sequence 67 - AAGUCGUAUUACACUCUUAGA - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21762498
    Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
    Wang T, Chen L, Zhao M, Tian Q, Zhang WH
    BMC Genomics (2011) 12:367