miRBase entry: mtr-MIR2592bl

Stem-loop mtr-MIR2592bl


Accession
MI0019078
Description
Medicago truncatula mtr-MIR2592bl precursor miRNA
Gene family
MIPF0000815; MIR2592

Literature search
1 open access papers mention mtr-MIR2592bl
(2 sentences)

Sequence

aguuguuguuUGGCAAGUUUGAAUUUACCUCAuucaaagguaagauaauuguuuuaguuggaaggugccuuccaacuacaacaauuguccuccucuggaugGAGUAAUUCAAACUUGUUAAAcggcagga
..(((((((((((((((((((((((.((.(((((((.(((...((((((((((.((((((((((....)))))))))).))))))))))..))).))))))).)))))))))))))))))))))))))..

Structure
ag                       U  C       a   uaa          u          g 
  uuguuguuUGGCAAGUUUGAAUU AC UCAuuca agg   gauaauuguu uaguuggaag u
  ||||||||||||||||||||||| || ||||||| |||   |||||||||| ||||||||||  
  gacggcAAAUUGUUCAAACUUAA UG Gguaggu ucc   cuguuaacaa aucaaccuuc g
ag                       -  A       c   -uc          c          c 


Annotation confidence Not enough data
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Genome context
chr4: 20867262-20867391 [+]

Database links

Mature mtr-miR2592bl-5p

Accession MIMAT0022205
Description Medicago truncatula mtr-miR2592bl-5p mature miRNA
Sequence 11 - UGGCAAGUUUGAAUUUACCUCA - 32
Evidence experimental
Illumina [1]

Mature mtr-miR2592bl-3p

Accession MIMAT0022206
Description Medicago truncatula mtr-miR2592bl-3p mature miRNA
Sequence 102 - GAGUAAUUCAAACUUGUUAAA - 122
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21762498
    Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high-throughput sequencing
    Wang T, Chen L, Zhao M, Tian Q, Zhang WH
    BMC Genomics (2011) 12:367