Stem-loop sequence sbi-MIR5568a

Accession

MI0019103 (change log)

Previous IDs

sbi-MIR5568

Description

Sorghum bicolor miR5568 stem-loop

Gene family

MIPF0001377; MIR5568

Literature search

2 open access papers mention sbi-MIR5568a
(3 sentences)

Stem-loop

   ucccaaca                               a   g  u c   gg 
5'         uuccaaauuguaagucguucuggcuuuucua gua au g ugu  c
           ||||||||||||||||||||||||||||||| ||| || | |||   
3'         aagguuuaacauucagcgagaccgagaagau uau ua c acg  u
   ----uaac                               g   g  u c   ua 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Sorghum_bicolor_NCBIv3; GCA_000003195.3): chr7: 1926888-1926993 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0019103

Mature sequence sbi-miR5568a

• Accession: MIMAT0022248
• Previous IDs: sbi-miR5568
• Sequence: 81 - cagagcgacuuacaauuugga - 101
• Evidence: experimental; 454 [1]

References

1. PMID:21907786 "Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum" Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R Genomics. 98:460-468(2011).