Stem-loop sbi-MIR5568a

Accession

MI0019103

Description

Sorghum bicolor sbi-MIR5568a precursor miRNA

Gene family

MIPF0001377; MIR5568

Literature search

2 open access papers mention sbi-MIR5568a
(3 sentences)

Sequence

ucccaacauuccaaauuguaagucguucuggcuuuucuaaguagauugcuguggcuaugcaccuauguauguagaagagcCAGAGCGACUUACAAUUUGGAacaau
........(((((((((((((((((((((((((((((((.(((.((....(((......)))..)).))).)))))))))))))))))))))))))))))))....

Structure

ucccaaca                               a   g  ugcu   gc 
        uuccaaauuguaagucguucuggcuuuucua gua au    gug  u
        ||||||||||||||||||||||||||||||| ||| ||    |||   
        aAGGUUUAACAUUCAGCGAGACcgagaagau uau ua    cac  a
----uaac                               g   g  --uc   gu 

Annotation confidence Not enough data

Genome context

chr7: 1926888-1926993 [-]

Mature sbi-miR5568a

• Accession: MIMAT0022248
• Description: Sorghum bicolor sbi-miR5568a mature miRNA
• Sequence: 81 - CAGAGCGACUUACAAUUUGGA - 101
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21907786
   Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum
   "Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R"
   "Genomics (2011) 98:460-468