miRBase entry: mmu-mir-5621

Stem-loop mmu-mir-5621


Accession
MI0019189
Symbol
MGI: Mir5621
Description
Mus musculus mmu-mir-5621 precursor miRNA


Sequence

116 reads, 5 reads per million, 27 experiments
AGGAGGUCCUGGGGCCGCCCUGAaggcagaacaugagaauucUGGGCCCUCCAGACCUCAUGC
..((((((.(((((..((((.(((..(.........)..))).)))).)))))))))))....

Structure
--AG      C     CC    U   gg aga 
    GAGGUC UGGGG  GCCC GAa  c   a
    |||||| |||||  |||| |||  |   c
    CUCCAG ACCUC  CGGG cuu  g   a
CGUA      -     -C    U   aa agu 


Annotation confidence Not enough data
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Genome context
chr11: 115795824-115795886 [+]

Database links

Mature mmu-miR-5621-5p

Accession MIMAT0022369
Description Mus musculus mmu-miR-5621-5p mature miRNA
Sequence 1 - AGGAGGUCCUGGGGCCGCCCUGA - 23
Evidence not_experimental

Mature mmu-miR-5621-3p

Accession MIMAT0022370
Description Mus musculus mmu-miR-5621-3p mature miRNA
Sequence 43 - UGGGCCCUCCAGACCUCAUGC - 63
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 21911355
    miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades
    "Friedlander MR, Mackowiak SD, Li N, Chen W, Rajewsky N"
    "Nucleic Acids Res (2012) 40:37-52