Stem-loop sequence gma-MIR5674a

Accession

MI0019271 (change log)

Previous IDs

gma-MIR5674

Description

Glycine max miR5674 stem-loop

Gene family

MIPF0001447; MIR5674

Literature search

2 open access papers mention gma-MIR5674a
(2 sentences)

Stem-loop

   c    gg  -       uuu          ucauuuaagaaguuaguugcuucuuucagcuuaccaacaaugaagccacacaaucaagaauuacaagugacaa 
5'  acuu  gu ugauggu   caauacaauu                                                                         c
    ||||  || |||||||   ||||||||||                                                                         a
3'  ugag  ua acuauua   guuguguuaa                                                                         u
   c    au  c       cau          uaacugacaaauacauuuguauuugaacauaccaaaaaaaaaggauuuuaccaacaguuucccuaaaaacaau 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr9: 39974819-39975026 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0019271

Mature sequence gma-miR5674a

• Accession: MIMAT0022459
• Previous IDs: gma-miR5674
• Sequence: 178 - uaauuguguuguacauuauca - 198
• Evidence: experimental; Illumina [1], RT-PCR [1]

References

1. PMID:21219599 "Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing" Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS BMC Plant Biol. 11:5(2011).