miRBase entry: mtr-MIR5746

Stem-loop mtr-MIR5746


Accession
MI0019671
Description
Medicago truncatula mtr-MIR5746 precursor miRNA


Sequence

caagguugguuuaguugauaaagaguuaacucacuuguaagguugUGGAUUCAACUCUAAGUGUCGGUUgaaaaccuuu
.((((((..(((((((((((.((((((((.((((..........)))).)).))))))...))))))))))))))))).

Structure
c      gg           --a      -  c    uugu 
 aagguu  uuuaguugaua   agaguu aa ucac    a
 ||||||  |||||||||||   |||||| || ||||     
 uuccaa  aagUUGGCUGU   UCUCAA UU GGUg    a
u      --           GAA      C  A    uugg 


Annotation confidence Not enough data
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Genome context
chr2: 2646630-2646708 [-]

Database links

Mature mtr-miR5746

Accession MIMAT0023126
Description Medicago truncatula mtr-miR5746 mature miRNA
Sequence 46 - UGGAUUCAACUCUAAGUGUCGGUU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553