Stem-loop mtr-MIR5745b

Accession

MI0019690

Description

Medicago truncatula mtr-MIR5745b precursor miRNA

Gene family

MIPF0001513; MIR5745

Sequence

uuugaaagagUUUAAUUUAUAUACAUCGUCAguguacaaaaguuuuaauugaugugacaacguauuauuggaugcauguauaacauuuucauacacugacgguguauauaaauuaaacucauuuugaaa
((((((((((((((((((((((((((((((((((((..(((((.(((....((((..(((.......)))...))))...))).)))))..))))))))))))))))))))))))))))).))))))).

Structure

-       -                             ca     u   auug    -ga   cg 
 uuugaaa gagUUUAAUUUAUAUACAUCGUCAgugua  aaagu uua    augu   caa  u
 ||||||| |||||||||||||||||||||||||||||  ||||| |||    ||||   |||  a
 aaguuuu cucaaauuaaauauauguggcagucacau  uuuua aau    uacg   guu  u
a       a                             ac     c   -aug    uag   au 

Annotation confidence Not enough data

Genome context

chr7: 26377742-26377870 [+]

Mature mtr-miR5745b

• Accession: MIMAT0023145
• Description: Medicago truncatula mtr-miR5745b mature miRNA
• Sequence: 11 - UUUAAUUUAUAUACAUCGUCA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553