miRBase entry: gma-MIR5761a

Stem-loop gma-MIR5761a


Accession
MI0019702
Description
Glycine max gma-MIR5761a precursor miRNA

Literature search
1 open access papers mention gma-MIR5761a
(1 sentences)

Sequence

gauuggaagcaugagcuucaaaaccaagagguuguuuagagauugccuucacaacaaauuuucuauugcauucuugauauguagacccuccucugaugcauuuguaaugaugauccaaacuugguuguuggaaccucaaaacauuauguucuauuugaguuucccUUUUGUGUCGUGAAGCUUUUGauauccaaga
..(((((.(((.((((((((..(((((((((((((..((.......))..)))))...........(((((.......)))))((((.......(((.((((......))))))).......))))...((((.(((((((((...)))....)))))).)))))))))).))..)))))))).)).).)))))..

Structure
ga     a -  u        aa  -      guuguuuagagauugccuucacaacaaauuuucuauugcauucuugauauguagacccuccucugaugcauuuguaaugaugauccaaacuugguuguu    c      ----   u 
  uugga g ca gagcuuca  ac caagag                                                                                                   ggaa cucaaa    aca  
  ||||| | || ||||||||  || ||||||                                                                                                   |||| ||||||    ||| u
  aaccu u GU UUCGAAGU  UG GUUUUc                                                                                                   ccuu gaguuu    ugu  
ag     a a  U        GC  U      ---------------------------------------------------------------------------------------------------    u      aucu   a 


Annotation confidence Not enough data
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Genome context
chr10: 51252115-51252310 [-]

Database links

Mature gma-miR5761a

Accession MIMAT0023157
Description Glycine max gma-miR5761a mature miRNA
Sequence 166 - UUUUGUGUCGUGAAGCUUUUG - 186
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553