miRBase entry: gma-MIR156p

Stem-loop gma-MIR156p


Accession
MI0019741
Description
Glycine max gma-MIR156p precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
40 open access papers mention gma-MIR156p
(164 sentences)

Sequence

cuuugggagaUUGACAGAAGAAAGGGAGCACaugcugcaauuauaucaacacauaccuuugccgugcgugcucucuuuucuuccugucaaucucgaauca
......(((((((((((((((((((((((((.(((.((((...(((......)))...)))).))).)))))).)))))))).)))))))))))......

Structure
cuuugg           -        -      a   u    uua   ca 
      gagaUUGACAG AAGAAAGG GAGCAC ugc gcaa   uau  a
      ||||||||||| |||||||| |||||| ||| ||||   |||   
      cucuaacuguc uucuuuuc cucgug gug cguu   aua  c
acuaag           c        u      c   c    ucc   ca 


Annotation confidence Not enough data
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Genome context
chr11: 462200-462299 [-]

Database links

Mature gma-miR156p

Accession MIMAT0023196
Description Glycine max gma-miR156p mature miRNA
Sequence 11 - UUGACAGAAGAAAGGGAGCAC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22156213
    MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
    "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
    "Genes Dev (2011) 25:2540-2553