miRBase entry: osa-MIR5833

Stem-loop osa-MIR5833


Accession
MI0019853
Description
Oryza sativa osa-MIR5833 precursor miRNA

Literature search
1 open access papers mention osa-MIR5833
(1 sentences)

Sequence

uccucuaucUCCUCCUCGGGCUCAUCGGGCucagccucaaagcccgguggggagggagga
((((((..((((((.(((((((....((((...))))...))))))).))))))))))))

Structure
      au      C       CAUC    u 
uccucu  cUCCUC UCGGGCU    GGGC  
||||||  |||||| |||||||    |||| c
aggagg  gagggg ggcccga    uccg  
      --      u       -aac    a 


Annotation confidence Not enough data
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Genome context
Chr5: 9341240-9341299 [-]

Database links

Mature osa-miR5833

Accession MIMAT0023308
Description Oryza sativa osa-miR5833 mature miRNA
Sequence 10 - UCCUCCUCGGGCUCAUCGGGC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22158467
    Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
    "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
    "Plant Cell (2011) 23:4185-4207