miRBase entry: hco-mir-5910

Stem-loop hco-mir-5910


Accession
MI0020039
Description
Haemonchus contortus hco-mir-5910 precursor miRNA


Sequence

uccaagcgugCCUCCCCAAUUCGAUCGAGGCGAguucauacaucgcccagacgaaguuggggaagcauauucuga
.......((((.(((((((((((.((..(((((((....)).)))))..)))).))))))))).)))).......

Structure
uccaagc    C         -  A  GA     -  u 
       gugC UCCCCAAUU CG UC  GGCGA gu c
       |||| ||||||||| || ||  ||||| ||  
       uacg agggguuga gc ag  ccgcu ca a
agucuua    a         a  -  ac     a  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hco-miR-5910

Accession MIMAT0023366
Description Haemonchus contortus hco-miR-5910 mature miRNA
Sequence 11 - CCUCCCCAAUUCGAUCGAGGCGA - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22216965
    Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
    Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
    BMC Genomics (2012) 13:4