miRBase entry: hco-mir-252

Stem-loop hco-mir-252


Accession
MI0020044
Description
Haemonchus contortus hco-mir-252 precursor miRNA
Gene family
MIPF0000285; mir-252


Sequence

uuugcaagugCUAAGUAGUGGUGCCGCAGGUAACcuguaugcgauuaccugccgccugcugcuuaccauuuguacg
..((((((((.((((((((((.((.((((((((((.....).).)))))))).)))))))))))).))))))))..

Structure
uu        C          U  C        - - u 
  ugcaagug UAAGUAGUGG GC GCAGGUAA C c g
  |||||||| |||||||||| || |||||||| | | u
  auguuuac auucgucguc cg cguccauu g g a
gc        c          -  c        a c u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hco-miR-252

Accession MIMAT0023372
Description Haemonchus contortus hco-miR-252 mature miRNA
Sequence 11 - CUAAGUAGUGGUGCCGCAGGUAAC - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22216965
    Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
    Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
    BMC Genomics (2012) 13:4