miRBase entry: hco-mir-5922

Stem-loop hco-mir-5922


Accession
MI0020069
Description
Haemonchus contortus hco-mir-5922 precursor miRNA


Sequence

ugguaguguuCGGGUGACUUGAGUACAUGAACUuugacugaccauguacucaagucgcccaaacaccacug
.(((.(((((.((((((((((((((((((..(.......)..)))))))))))))))))).))))).))).

Structure
u   a     C                  AA Uu 
 ggu guguu GGGUGACUUGAGUACAUG  C  u
 ||| ||||| ||||||||||||||||||  |  g
 uca cacaa cccgcugaacucauguac  g  a
g   c     a                  ca uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hco-miR-5922

Accession MIMAT0023398
Description Haemonchus contortus hco-miR-5922 mature miRNA
Sequence 11 - CGGGUGACUUGAGUACAUGAACU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22216965
    Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
    Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
    BMC Genomics (2012) 13:4