Stem-loop hco-mir-5912b

Accession

MI0020092

Description

Haemonchus contortus hco-mir-5912b precursor miRNA

Gene family

MIPF0001497; mir-5912

Sequence

uggguagacuuggagcaaggaugggguuaggugcauucgaguauguccucggguagucggAUAUUCGAGUCCCUGCUCCCAGCcaaccuagacaagcuaucacaa
(((((((.((((.((...((.(((((.((((.(.((((((((((....((((....))))))))))))))))))).))))).))...))...))))))))).)).

Structure

-  -     a    --g  caa  a     u    u c          gucc    g 
 ug gguag cuug   ag   gg ugggg uagg g auucgaguau    ucgg u
 || ||||| ||||   ||   || ||||| |||| | ||||||||||    ||||  
 ac cuauc gaac   uc   cC ACCCU GUCC C UGAGCUUAUA    ggcu a
a  a     -    aga  caa  G     C    - -          ----    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5912b

• Accession: MIMAT0023423
• Description: Haemonchus contortus hco-miR-5912b mature miRNA
• Sequence: 61 - AUAUUCGAGUCCCUGCUCCCAGC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4