Stem-loop hco-mir-5918d

Accession

MI0020111

Description

Haemonchus contortus hco-mir-5918d precursor miRNA

Gene family

MIPF0001395; mir-5918

Sequence

agugggauaacggguaacacgauggaagacaagcuuucccuucugCUCGGCUUCUCAUCGUGUUACCCAacaucucauc
.(((((((...(((((((((((((((((.(.(((..........))).).)))).)))))))))))))...))))))).

Structure

a       aac             -    a a   uuuc 
 gugggau   ggguaacacgaug gaag c agc    c
 |||||||   ||||||||||||| |||| | |||     
 uacucua   CCCAUUGUGCUAC CUUC G UCg    c
c       caA             U    G C   ucuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5918d

• Accession: MIMAT0023442
• Description: Haemonchus contortus hco-miR-5918d mature miRNA
• Sequence: 46 - CUCGGCUUCUCAUCGUGUUACCCA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4