Stem-loop sequence sly-MIR482c

AccessionMI0020251 (change log)
DescriptionSolanum lycopersicum miR482c stem-loop
Gene family MIPF0000403; MIR482
Literature search

23 open access papers mention sly-MIR482c
(243 sentences)

Stem-loop 
   ----   uu  g     g   u              -            -ua     u 
5'     gug  uc aggag ugu ggaguggguggugu gguaagauuuca   uuuau u
       |||  || ||||| ||| |||||||||||||| ||||||||||||   ||||| u
3'     uac  ag ucuuc gua ccuuacccgccaua ccguucuagagu   aaaua c
   ucuu   -u  -     g   u              a            uaa     c
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (SL2.50; GCA_000188115.2) Overlapping transcripts
chr6: 37388175-37388285 [-]
intergenic
Clustered miRNAs
< 10kb from sly-MIR482c
sly-MIR482cchr6: 37388175-37388285 [-]
sly-MIR482bchr6: 37380417-37380541 [-]
sly-MIR482dchr6: 37380095-37380240 [-]
Database links

Mature sequence sly-miR482c

Accession MIMAT0023603
Sequence

70 -  

ucuugccaauaccgcccauucc

 - 91

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Evidence not experimental

References

1
PMID:22307647 "MicroRNA regulation of plant innate immune receptors" Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B Proc Natl Acad Sci U S A. 109:1790-1795(2012).