Stem-loop stu-MIR6027

Accession

MI0020259

Description

Solanum tuberosum stu-MIR6027 precursor miRNA

Gene family

MIPF0001424; MIR6027

Literature search

2 open access papers mention stu-MIR6027
(5 sentences)

Sequence

uuucauaauuuuacaugauuauggguagcacaaggauuaaugugaaacaaauaagugauaugugaagaacauuggagaauucaaagaguuaguuguuaggaagaaaacacuuuguguuucucgUGAAUCCUUCGGCUAUCCAUAAucauguugaaugugugacuu
..(((((((((.(((((((((((((((((..(((((((.(((.((((((...(((((..........((((......(((((...)))))...))))..........)))))..)))))).))).)))))))..))))))))))))))))).)))).)))))...

Structure

-uu     -    u                 ac       a   u      aau     auaugugaag    uuggag     a 
   ucaua auuu acaugauuauggguagc  aaggauu aug gaaaca   aagug          aaca      aauuc  
   ||||| |||| |||||||||||||||||  ||||||| ||| ||||||   |||||          ||||      ||||| a
   agugu uaag uguacuAAUACCUAUCG  UUCCUAA Ugc cuuugu   uucac          uugu      uugag  
uuc     g    u                 GC       G   u      -gu     aaaagaagga    ---uga     a 

Annotation confidence Not enough data

Genome context

JH137798.1: 3105798-3105962 [-]

Mature stu-miR6027

• Accession: MIMAT0023612
• Description: Solanum tuberosum stu-miR6027 mature miRNA
• Sequence: 124 - UGAAUCCUUCGGCUAUCCAUAA - 145
• Evidence: not_experimental

References

1. PubMed ID: 22307647
   MicroRNA regulation of plant innate immune receptors
   "Li F, Pignatta D, Bendix C, Brunkard JO, Cohn MM, Tung J, Sun H, Kumar P, Baker B"
   "Proc Natl Acad Sci U S A (2012) 109:1790-1795