miRBase entry: bna-MIR164c

Stem-loop bna-MIR164c


Accession
MI0020270
Description
Brassica napus bna-MIR164c precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
9 open access papers mention bna-MIR164c
(15 sentences)

Sequence

aacacuugcUGGAGAAGCAGGGCACGUGCGaacuaaugagagaucugugcauguugaucauauuuuugcacguguucuacuacuccaacac
......((.(((((.((.((((((((((((((...((((..(((........)))..))))...)))))))))))))).)).))))).)).

Structure
aacacu  c     A  C              cua    ga   cug 
      ug UGGAG AG AGGGCACGUGCGaa   auga  gau   u
      || ||||| || ||||||||||||||   ||||  |||    
      ac accuc uc ucuugugcacguuu   uacu  uug   g
-----c  a     a  a              uua    ag   uac 


Annotation confidence Not enough data
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Genome context
EM:AC189626: 18955-19045 [+]

Database links

Mature bna-miR164c

Accession MIMAT0023623
Description Brassica napus bna-miR164c mature miRNA
Sequence 10 - UGGAGAAGCAGGGCACGUGCG - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22138974
    Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
    "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
    "Plant Physiol (2012) 158:813-823