Stem-loop sequence ame-mir-6039

AccessionMI0020306 (change log)
DescriptionApis mellifera miR-6039 stem-loop
Stem-loop
   --           -a  g        a        gua  a    g 
5'   uucuacuuuaa  uc aacgcgug guuuacgu   gc uuga c
     |||||||||||  || |||||||| ||||||||   || ||||  
3'   aagaugagauu  ag uugugcac cagaugca   cg aauu a
   uu           cc  g        a        --g  -    u 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (AMEL4.5; GCA_000002195.1) Overlapping transcripts
GL630519.1: 17765-17852 [+]
intergenic
Database links

Mature sequence ame-miR-6039-5p

Accession MIMAT0023659
Sequence

11 - 

aaucgaacgcgugaguuuacgu

 - 32

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Evidence experimental; Illumina [1-3]

References

1
PMID:22458842 "Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers" Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S Insect Mol Biol. 21:297-303(2012).
2
PMID:22409512 "Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome" Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y Genes Brain Behav. 11:660-670(2012).
3
PMID:26853694 "MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)" Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL Insect Mol Biol. 25:216-226(2016).