Stem-loop sequence ame-mir-252b

AccessionMI0020309 (change log)
DescriptionApis mellifera miR-252b stem-loop
Literature search

2 open access papers mention ame-mir-252b
(2 sentences)

Stem-loop
   --aa     c  uu       a      u      ugauu 
5'     ucugu ug  aaguagu gugucg agauga     u
       ||||| ||  ||||||| |||||| ||||||      
3'     agaua ac  uucauua cacggu ucuacu     a
   auaa     u  uu       g      -      uaaag 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (AMEL4.5; GCA_000002195.1) Overlapping transcripts
CM000066.5: 7011507-7011585 [-]
intergenic
Clustered miRNAs
< 10kb from ame-mir-252b
ame-mir-6057CM000066.5: 7011877-7011951 [-]
ame-mir-252bCM000066.5: 7011507-7011585 [-]
ame-mir-252aCM000066.5: 7005854-7005953 [-]
Database links

Mature sequence ame-miR-252b-5p

Accession MIMAT0023662
Sequence

11 - 

uuaaguaguagugucguagauga

 - 33

Get sequence
Evidence experimental; Illumina [1-3]

References

1
PMID:22458842 "Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers" Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S Insect Mol Biol. 21:297-303(2012).
2
PMID:22409512 "Behavioral plasticity in honey bees is associated with differences in brain microRNA transcriptome" Greenberg JK, Xia J, Zhou X, Thatcher SR, Gu X, Ament SA, Newman TC, Green PJ, Zhang W, Robinson GE, Ben-Shahar Y Genes Brain Behav. 11:660-670(2012).
3
PMID:26853694 "MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)" Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL Insect Mol Biol. 25:216-226(2016).