miRBase entry: ame-mir-6046

Stem-loop ame-mir-6046


Accession
MI0020316
Description
Apis mellifera ame-mir-6046 precursor miRNA


Sequence

cacuuaaggcacgguuacgguucucuucgcuguccuucgcgaguuuaaaUCGACGAGAAUUCCGUGACCGGUccuaggugug
((((((.(((.(((((((((((((((((((........)))))...........)))))..)))))))))))).))))))..

Structure
--      a   a         --     -----------     ugu 
  cacuua ggc cgguuacgg  uucuc           uucgc   c
  |||||| ||| |||||||||  |||||           |||||    
  guggau cUG GCCAGUGCC  AAGAG           gagcg   c
gu      c   -         UU     CAGCUaaauuu     cuu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000068.5: 11230401-11230482 [-]

Database links

Mature ame-miR-6046-3p

Accession MIMAT0023669
Description Apis mellifera ame-miR-6046-3p mature miRNA
Sequence 50 - UCGACGAGAAUUCCGUGACCGGU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22458842
    Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers
    "Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S"
    "Insect Mol Biol (2012) 21:297-303