Stem-loop sequence ame-mir-6049

AccessionMI0020320 (change log)
DescriptionApis mellifera miR-6049 stem-loop
Stem-loop
   a     a   a  -     ag  aua a       ---   a 
5'  ggcgg ggu gg aacgg  ga   g cgguggu   gcg u
    ||||| ||| || |||||  ||   | |||||||   ||| a
3'  ucgcc cca cc uugcc  cu   c gccacca   cgc c
   a     a   -  a     ga  -ag a       cau   c 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (AMEL4.5; GCA_000002195.1) Overlapping transcripts
CM000059.5: 3982866-3982946 [+]
intergenic
Database links

Mature sequence ame-miR-6049-5p

Accession MIMAT0023673
Sequence

11 - 

aggaacggaggaauagacggu

 - 31

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:22458842 "Next-generation small RNA sequencing for microRNAs profiling in Apis mellifera: comparison between nurses and foragers" Liu F, Peng W, Li Z, Li W, Li L, Pan J, Zhang S, Miao Y, Chen S, Su S Insect Mol Biol. 21:297-303(2012).
2
PMID:26853694 "MicroRNA signatures characterizing caste-independent ovarian activity in queen and worker honeybees (Apis mellifera L.)" Macedo LM, Nunes FM, Freitas FC, Pires CV, Tanaka ED, Martins JR, Piulachs MD, Cristino AS, Pinheiro DG, Simoes ZL Insect Mol Biol. 25:216-226(2016).