miRBase entry: hsa-mir-6078

Stem-loop hsa-mir-6078


Accession
MI0020355
Symbol
HGNC: MIR6078
Description
Homo sapiens hsa-mir-6078 precursor miRNA


Sequence

gcagaggagaaagagccaCCGCCUGAGCUAGCUGUGGacagaggcaaaacucuaacuucagcugguuuugagugagaagugggucucuguuaaaaugcua
(((...((.(.(((.((((((((.((((((((((.((..((((......))))..)).)))))))))).).)))....)))).))).).))....)))..

Structure
--   -gag  g a   g    ----   - U          U  ac    gc 
  gca    ga a aga ccaC    CGC C GAGCUAGCUG GG  agag  a
  |||    || | ||| ||||    ||| | |||||||||| ||  ||||   
  cgu    uu u ucu ggug    gug g uuuggucgac uc  ucuc  a
au   aaaa  g c   g    aaga   a u          u  aa    aa 


Annotation confidence Not enough data
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Genome context
chr10: 3991160-3991259 [+]

Database links

Mature hsa-miR-6078

Accession MIMAT0023703
Description Homo sapiens hsa-miR-6078 mature miRNA
Sequence 19 - CCGCCUGAGCUAGCUGUGG - 37
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 22282338
    Deep-sequencing of endothelial cells exposed to hypoxia reveals the complexity of known and novel microRNAs
    "Voellenkle C, Rooij Jv, Guffanti A, Brini E, Fasanaro P, Isaia E, Croft L, David M, Capogrossi MC, Moles A, Felsani A, Martelli F"
    "RNA (2012) 18:472-484