miRBase entry: cgr-let-7g

Stem-loop cgr-let-7g


Accession
MI0020373
Description
Cricetulus griseus cgr-let-7g precursor miRNA
Gene family
MIPF0000002; let-7


Sequence

347858 reads, 4819 reads per million, 6 experiments
auuccaggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCcaggaacagc
.((((.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))))).))))....

Structure
---a    a   U        A            ugagg    -a  a    a 
    uucc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
    |||| ||| |||||||| ||||||||||||     ||||  || ||||  
    aagg cCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
cgac    a   -        C            -----    gg  -    c 


Annotation confidence Low
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Genome context
JH000078.1: 2992041-2992137 [+]

Database links

Mature cgr-let-7g-5p

Accession MIMAT0023722
Description Cricetulus griseus cgr-let-7g-5p mature miRNA
Sequence 10 - UGAGGUAGUAGUUUGUACAGUU - 31
Evidence experimental
Illumina [1]

Mature cgr-let-7g-3p

Accession MIMAT0023723
Description Cricetulus griseus cgr-let-7g-3p mature miRNA
Sequence 67 - CUGUACAGGCCACUGCCUUGC - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75